Alignment by Simultaneous Harmonization of Layer/Adjacency Registration
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
images
:file
Overlapping tile image data in formats from most commercial microscopes
*.{ome.tiff,ome.tif,rcpnl,btf,nd2,tiff,tif,czi}
opt_dfp
Optional dark field image data
opt_ffp
Optional flat field image data
tif
*.ome.tif
A pyramidal, tiled OME-TIFF file created from input images.
versions
versions.yml
File containing software versions
